BLASTN 2.2.6 [Apr-09-2003]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

RID: 1070861916-14883-134760373861.BLASTQ3

Query= 
         (443 letters)


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences) 
           1,987,664 sequences; 9,567,374,405 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs

Taxonomy reports

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|28277695|gb|BC045444.1|  Danio rerio cDNA clone MGC:55744...   496   e-137 
gi|13677172|gb|AC010105.12|  Homo sapiens BAC clone RP11-563...    52   9e-04 
gi|532580|gb|M27067.1|EMEBIMG  Aspergillus nidulans phosphop...    52   9e-04 
gi|11968061|ref|NM_022498.1|  Rattus norvegicus protein phos...    50   0.003 
gi|34872275|ref|XM_346435.1|  Rattus norvegicus hypothetical...    50   0.003 
gi|18405182|ref|NM_129543.1|  Arabidopsis thaliana phosphopr...    50   0.003 
gi|20196974|gb|AC003000.3|  Arabidopsis thaliana chromosome ...    50   0.003 
gi|999340|gb|S78217.1|S78217  protein phosphatase 1 gamma 1 ...    50   0.003 
gi|3236123|dbj|D90166.1|RATPP1G2  Rattus norvegicus mRNA for...    50   0.003 
gi|3236122|dbj|D90165.1|RATPP1G1  Rattus norvegicus mRNA for...    50   0.003 
gi|166800|gb|M93411.1|ATHPPHAC  Arabidopsis thaliana phospho...    50   0.003 
gi|24641015|ref|NM_079999.2|  Drosophila melanogaster flap w...    48   0.014 
gi|24641013|ref|NM_167229.1|  Drosophila melanogaster flap w...    48   0.014 
gi|31880067|gb|AC093921.2|  Oryza sativa (japonica cultivar-...    48   0.014 
gi|20152080|gb|AY095072.1|  Drosophila melanogaster RE17877 ...    48   0.014 
gi|17861429|gb|AY069047.1|  Drosophila melanogaster GH05039 ...    48   0.014 
gi|8367|emb|X56439.1|DMPP1B  D.melanogaster PP1-beta 9C gene...    48   0.014 
gi|33412079|emb|BX004815.6|  Zebrafish DNA sequence from clo...    46   0.054 
gi|33112733|gb|AC118632.7|  Mus musculus chromosome 18, clon...    44   0.21  
gi|21306691|gb|AC103596.2|  Homo sapiens chromosome 1 clone ...    44   0.21  
gi|6635875|emb|AL135960.1|  Human DNA sequence from clone RP...    44   0.21  
gi|2642452|gb|AC002504.1|  Homo sapiens X PAC RP1-258N20 (Ro...    44   0.21  
gi|35209055|emb|BX005238.8|  Zebrafish DNA sequence from clo...    44   0.21  
gi|14589694|gb|AC074093.6|  Homo sapiens BAC clone RP11-206I...    44   0.21  
gi|6911928|emb|AJ131016.1|HSA131016  Homo sapiens SCL gene l...    44   0.21  
gi|26251788|gb|BC040537.1|  Homo sapiens, clone IMAGE:526590...    44   0.21  
gi|3176073|emb|AJ002486.1|MSAJ2486  Medicago sativa mRNA for...    44   0.21  
gi|3176071|emb|AJ002485.1|MSAJ2485  Medicago sativa mRNA for...    44   0.21  
gi|11094943|gb|AC084493.1|CBRG08J21  Caenorhabditis briggsae...    44   0.21  
gi|34495165|gb|AC127350.3|  Mus musculus BAC clone RP23-64P1...    42   0.84  
gi|34482131|gb|AC127269.3|  Mus musculus BAC clone RP23-432B...    42   0.84  
gi|23499630|gb|AC122423.2|  Mus musculus BAC clone RP24-171N...    42   0.84  
gi|37620300|gb|AC134791.8|  Mus musculus chromosome 14, clon...    42   0.84  
gi|31980771|ref|NM_013636.2|  Mus musculus protein phosphata...    42   0.84  
gi|14714913|gb|BC010613.1|  Mus musculus protein phosphatase...    42   0.84  
gi|18203763|gb|BC021646.1|  Mus musculus protein phosphatase...    42   0.84  
gi|33235760|gb|AC117668.9|  Mus musculus, clone RP23-367H12,...    42   0.84  
gi|32140818|gb|AY152836.1|  Felis catus clone BAC 160a17 maj...    42   0.84  
gi|32140815|gb|AY152835.1|  Felis catus clone PAC g7 major h...    42   0.84  
gi|23396222|gb|AC130455.2|  Homo sapiens chromosome 16 clone...    42   0.84  
gi|20564415|gb|AC025427.11|  Homo sapiens chromosome 10 clon...    42   0.84  
gi|20087106|gb|AC068062.7|  Homo sapiens chromosome 10 clone...    42   0.84  
gi|26344935|dbj|AK076009.1|  Mus musculus 10 days embryo who...    42   0.84  
gi|26353187|dbj|AK088229.1|  Mus musculus 2 days neonate thy...    42   0.84  
gi|15375156|gb|AC026401.7|  Homo sapiens chromosome 16 clone...    42   0.84  
gi|3417288|gb|U95740.1|HUU95740  Human Chromosome 16 BAC clo...    42   0.84  
gi|30268424|emb|BX284114.6|  Mouse DNA sequence from clone R...    42   0.84  
gi|1280038|gb|U53456.1|MMU53456  Mus musculus protein phosph...    42   0.84  
gi|25137140|emb|AL591544.30|  Mouse DNA sequence from clone ...    42   0.84  
gi|1680|emb|X61639.1|OCPP1B  O.cuniculus PP1-beta gene for p...    42   0.84  
gi|16944727|emb|AL162575.15|  Human DNA sequence from clone ...    42   0.84  
gi|12666264|emb|AL358174.12|  Human DNA sequence from clone ...    42   0.84  
gi|1332408|dbj|D85137.1|MUSPIM1K  Mouse mRNA for PP1gamma, c...    42   0.84  
gi|23395887|emb|AL929127.2|  Mouse DNA sequence from clone R...    42   0.84  
gi|471975|gb|M27071.1|MUSDIS2M1A  Mus musculus protein phosp...    42   0.84  
gi|37060012|gb|AC131714.4|  Mus musculus BAC clone RP23-179L...    40   3.3   
gi|28570522|gb|AC125077.4|  Mus musculus BAC clone RP23-473K...    40   3.3   
gi|27802067|gb|AC127365.4|  Mus musculus BAC clone RP23-8K10...    40   3.3   
gi|24462460|gb|AC122824.3|  Mus musculus BAC clone RP23-206D...    40   3.3   
gi|31419587|gb|BC053296.1|  Danio rerio cDNA clone MGC:64169...    40   3.3   
gi|22137534|gb|BC025311.1|  Homo sapiens hedgehog interactin...    40   3.3   
gi|34914463|ref|NM_193690.1|  Oryza sativa (japonica cultiva...    40   3.3   
gi|31342484|ref|NM_174258.2|  Bos taurus caldesmon, smooth m...    40   3.3   
gi|20143972|ref|NM_022475.1|  Homo sapiens hedgehog interact...    40   3.3   
gi|37182612|gb|AY358747.1|  Homo sapiens clone DNA139592 HIP...    40   3.3   
gi|34365936|gb|AC116713.8|  Mus musculus chromosome 9, clone...    40   3.3   
gi|33589943|gb|AC107806.10|  Mus musculus chromosome 3, clon...    40   3.3   
gi|30678862|ref|NM_100318.2|  Arabidopsis thaliana 2-oxoglut...    40   3.3   
gi|33874469|gb|BC009298.2|  Homo sapiens hedgehog interactin...    40   3.3   
gi|24251216|gb|AY154474.1|  Bos taurus l-caldesmon mRNA, com...    40   3.3   
gi|24211071|gb|AC079456.28|  Homo sapiens 12 BAC RP11-206B11...    40   3.3   
gi|21212787|gb|AY109296.1|  Zea mays PCO117045 mRNA sequence       40   3.3   
gi|22476068|gb|AC022210.8|  Homo sapiens BAC clone RP11-617F...    40   3.3   
gi|29465715|gb|AY083681.1|  Avena sativa clone OP14 receptor...    40   3.3   
gi|29465710|gb|AY083679.1|  Avena sativa clone OP10rc recept...    40   3.3   
gi|21903634|gb|AC015688.11|  Homo sapiens chromosome 17, clo...    40   3.3   
gi|21326253|gb|AC087878.7|  Homo sapiens chromosome 15, clon...    40   3.3   
gi|21240742|gb|AC044913.7|  Homo sapiens chromosome 15, clon...    40   3.3   
gi|21263229|gb|AC074140.5|  Homo sapiens chromosome 19 clone...    40   3.3   
gi|28393668|gb|BT004241.1|  Arabidopsis thaliana clone RAFL1...    40   3.3   
gi|14290369|gb|AC078962.30|  Homo sapiens 12 BAC RP11-338E21...    40   3.3   
gi|18464385|gb|AC104091.4|  Homo sapiens BAC clone RP11-1173...    40   3.3   
gi|18250131|gb|AC098588.3|  Homo sapiens BAC clone RP11-291L...    40   3.3   
gi|15408645|dbj|AP003203.3|  Oryza sativa (japonica cultivar...    40   3.3   
gi|12581039|emb|AL392110.12|  Human DNA sequence from clone ...    40   3.3   
gi|37537327|dbj|BS000060.1|  Pan troglodytes chromosome 22 c...    40   3.3   
gi|37591130|dbj|AP006540.1|  Lotus corniculatus var. japonic...    40   3.3   
gi|37573161|dbj|AP005123.4|  Oryza sativa (japonica cultivar...    40   3.3   
gi|10178452|emb|AL160053.15|  Human DNA sequence from clone ...    40   3.3   
gi|31581060|dbj|AP006429.1|  Lotus corniculatus var. japonic...    40   3.3   
gi|13959779|gb|AY009317.1|  Homo sapiens hedgehog-interactin...    40   3.3   
gi|32166066|emb|AL824714.17|  Mouse DNA sequence from clone ...    40   3.3   
gi|31790691|dbj|AP003783.4|  Homo sapiens genomic DNA, chrom...    40   3.3   
gi|7768786|dbj|AP001707.1|  Homo sapiens genomic DNA, chromo...    40   3.3   
gi|11528009|gb|AY009951.1|  Homo sapiens hedgehog-interactin...    40   3.3   
gi|20152690|emb|AL671042.10|  Mouse DNA sequence from clone ...    40   3.3   
gi|23337501|emb|AL806513.5|  Mouse DNA sequence from clone R...    40   3.3   
gi|23337712|emb|AL844221.6|  Mouse DNA sequence from clone R...    40   3.3   
gi|24032995|emb|AL672028.13|  Mouse DNA sequence from clone ...    40   3.3   
gi|20069377|emb|AL731652.1|  Dog DNA sequence from clone RP8...    40   3.3   

Alignments


>gi|28277695|gb|BC045444.1|   Danio rerio cDNA clone MGC:55744 IMAGE:3816387, complete cds
          Length = 2263

 Score =  496 bits (250), Expect = e-137
 Identities = 250/250 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    gatgagtgttgatgagacccttatgtgctcatttcagattctgaaaccagcagagaagaa 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 gatgagtgttgatgagacccttatgtgctcatttcagattctgaaaccagcagagaagaa 1146

                                                                        
Query: 61   ggtgctgtcatatggcggcgctggaggatttgggaacagcagacctgtaactcctcctcg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1147 ggtgctgtcatatggcggcgctggaggatttgggaacagcagacctgtaactcctcctcg 1206

                                                                        
Query: 121  gaacacagccaagggtggcaaagccaagaaataacatcaactactgcagcatgcctgaat 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1207 gaacacagccaagggtggcaaagccaagaaataacatcaactactgcagcatgcctgaat 1266

                                                                        
Query: 181  atcctgttcatcattctacctctccttttctttctcctcttctactccaaacaccaaact 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1267 atcctgttcatcattctacctctccttttctttctcctcttctactccaaacaccaaact 1326

                      
Query: 241  agtgcagtgc 250
            ||||||||||
Sbjct: 1327 agtgcagtgc 1336




 Score =  287 bits (145), Expect = 8e-75
 Identities = 145/145 (100%)
 Strand = Plus / Plus

                                                                        
Query: 265  ctctctcatcaagacaagaatgctgggaatctgaatggtcatgtgcgtgaatgaaatgct 324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1351 ctctctcatcaagacaagaatgctgggaatctgaatggtcatgtgcgtgaatgaaatgct 1410

                                                                        
Query: 325  tttgtggagtttgtgggtttctatgtgaaacagcattgtgtgtgtatttgttgaaagtga 384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1411 tttgtggagtttgtgggtttctatgtgaaacagcattgtgtgtgtatttgttgaaagtga 1470

                                     
Query: 385  gtttgttgtgagattgtatgcaagg 409
            |||||||||||||||||||||||||
Sbjct: 1471 gtttgttgtgagattgtatgcaagg 1495



>gi|13677172|gb|AC010105.12|   Homo sapiens BAC clone RP11-563E24 from 2, complete sequence
          Length = 193320

 Score = 52.0 bits (26), Expect = 9e-04
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                        
Query: 198    acctctccttttctttctcctcttct 223
              ||||||||||||||||||||||||||
Sbjct: 143311 acctctccttttctttctcctcttct 143336



>gi|532580|gb|M27067.1|EMEBIMG   Aspergillus nidulans phosphoprotein phosphatase 1 mRNA, complete cds
          Length = 2248

 Score = 52.0 bits (26), Expect = 9e-04
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                              
Query: 24   tgtgctcatttcagattctgaaaccagcagagaa 57
            ||||||| || |||||||||||||||||||||||
Sbjct: 1751 tgtgctctttccagattctgaaaccagcagagaa 1784



>gi|11968061|ref|NM_022498.1|   Rattus norvegicus protein phosphatase 1, catalytic subunit, gamma
           isoform (Ppp1cc), mRNA
          Length = 2193

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 1   gatgagtgttgatgagacccttatgtgctcatttcagattctgaaaccagcagagaa 57
           ||||||||| ||||||||||| |||||||| || |||||| | || || ||||||||
Sbjct: 928 gatgagtgtggatgagaccctcatgtgctccttccagattttaaagcctgcagagaa 984



>gi|34872275|ref|XM_346435.1|   Rattus norvegicus hypothetical gene supported by NM_022498
           (LOC360258), mRNA
          Length = 2204

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 1   gatgagtgttgatgagacccttatgtgctcatttcagattctgaaaccagcagagaa 57
           ||||||||| ||||||||||| |||||||| || |||||| | || || ||||||||
Sbjct: 936 gatgagtgtggatgagaccctcatgtgctccttccagattttaaagcctgcagagaa 992



>gi|18405182|ref|NM_129543.1|   Arabidopsis thaliana phosphoprotein phosphatase type 1 catalytic
           subunit (At2g39840) mRNA, complete cds
          Length = 1292

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   gatgagtgttgatgagacccttatgtgctcatttcagattctgaaaccagcagagaagaa 60
           |||||| || || |||| |||||||||||| ||||||||| |||| || || ||||||||
Sbjct: 897 gatgagcgtggacgagaaccttatgtgctcgtttcagattttgaagcccgctgagaagaa 956

            
Query: 61  g 61
           |
Sbjct: 957 g 957



>gi|20196974|gb|AC003000.3|   Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete
             sequence
          Length = 92624

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                         
Query: 1     gatgagtgttgatgagacccttatgtgctcatttcagattctgaaaccagcagagaagaa 60
             |||||| || || |||| |||||||||||| ||||||||| |||| || || ||||||||
Sbjct: 71232 gatgagcgtggacgagaaccttatgtgctcgtttcagattttgaagcccgctgagaagaa 71291

              
Query: 61    g 61
             |
Sbjct: 71292 g 71292



>gi|999340|gb|S78217.1|S78217   protein phosphatase 1 gamma 1 [rats, striatum, mRNA Partial, 1508
           nt]
          Length = 1508

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 1   gatgagtgttgatgagacccttatgtgctcatttcagattctgaaaccagcagagaa 57
           ||||||||| ||||||||||| |||||||| || |||||| | || || ||||||||
Sbjct: 216 gatgagtgtggatgagaccctcatgtgctccttccagattttaaagcctgcagagaa 272



>gi|3236123|dbj|D90166.1|RATPP1G2   Rattus norvegicus mRNA for catalytic subunit of protein phosphatase
            1, complete cds, clone:PP-1 gamma 2
          Length = 1427

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                     
Query: 1    gatgagtgttgatgagacccttatgtgctcatttcagattctgaaaccagcagagaa 57
            ||||||||| ||||||||||| |||||||| || |||||| | || || ||||||||
Sbjct: 1042 gatgagtgtggatgagaccctcatgtgctccttccagattttaaagcctgcagagaa 1098



>gi|3236122|dbj|D90165.1|RATPP1G1   Rattus norvegicus mRNA for catalytic subunit of protein phosphatase
           1, complete cds, clone:PP-1 gamma 1
          Length = 2193

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 1   gatgagtgttgatgagacccttatgtgctcatttcagattctgaaaccagcagagaa 57
           ||||||||| ||||||||||| |||||||| || |||||| | || || ||||||||
Sbjct: 928 gatgagtgtggatgagaccctcatgtgctccttccagattttaaagcctgcagagaa 984



>gi|166800|gb|M93411.1|ATHPPHAC   Arabidopsis thaliana phosphoprotein phosphatase-type 1 catalytic
           subunit mRNA, complete cds
          Length = 1292

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   gatgagtgttgatgagacccttatgtgctcatttcagattctgaaaccagcagagaagaa 60
           |||||| || || |||| |||||||||||| ||||||||| |||| || || ||||||||
Sbjct: 897 gatgagcgtggacgagaaccttatgtgctcgtttcagattttgaagcccgctgagaagaa 956

            
Query: 61  g 61
           |
Sbjct: 957 g 957



>gi|24641015|ref|NM_079999.2|   Drosophila melanogaster flap wing CG2096-PB (flw) mRNA, complete cds
          Length = 2179

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 23   atgtgctcatttcagattctgaaaccagcagagaagaagg 62
            ||||||||||| ||||| ||||||||| | ||||||||||
Sbjct: 1444 atgtgctcattccagatcctgaaaccatccgagaagaagg 1483



>gi|24641013|ref|NM_167229.1|   Drosophila melanogaster flap wing CG2096-PA (flw) mRNA, complete cds
          Length = 2571

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 23   atgtgctcatttcagattctgaaaccagcagagaagaagg 62
            ||||||||||| ||||| ||||||||| | ||||||||||
Sbjct: 1837 atgtgctcattccagatcctgaaaccatccgagaagaagg 1876



>gi|31880067|gb|AC093921.2|   Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0041A22, complete sequence
          Length = 117919

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 201   tctccttttctttctcctcttcta 224
             ||||||||||||||||||||||||
Sbjct: 30073 tctccttttctttctcctcttcta 30050



>gi|20152080|gb|AY095072.1|   Drosophila melanogaster RE17877 full insert cDNA
          Length = 2126

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 23   atgtgctcatttcagattctgaaaccagcagagaagaagg 62
            ||||||||||| ||||| ||||||||| | ||||||||||
Sbjct: 1396 atgtgctcattccagatcctgaaaccatccgagaagaagg 1435



>gi|17861429|gb|AY069047.1|   Drosophila melanogaster GH05039 full length cDNA
          Length = 2727

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 23   atgtgctcatttcagattctgaaaccagcagagaagaagg 62
            ||||||||||| ||||| ||||||||| | ||||||||||
Sbjct: 1993 atgtgctcattccagatcctgaaaccatccgagaagaagg 2032



>gi|8367|emb|X56439.1|DMPP1B   D.melanogaster PP1-beta 9C gene for protein phosphatase 1
          Length = 1584

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 23  atgtgctcatttcagattctgaaaccagcagagaagaagg 62
           ||||||||||| ||||| ||||||||| | ||||||||||
Sbjct: 926 atgtgctcattccagatcctgaaaccatccgagaagaagg 965



>gi|33412079|emb|BX004815.6|   Zebrafish DNA sequence from clone CH211-31O18 in linkage group 9,
             complete sequence
          Length = 172899

 Score = 46.1 bits (23), Expect = 0.054
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 201   tctccttttctttctcctcttct 223
             |||||||||||||||||||||||
Sbjct: 54131 tctccttttctttctcctcttct 54153



>gi|33112733|gb|AC118632.7|   Mus musculus chromosome 18, clone RP24-94D24, complete sequence
          Length = 198636

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 199    cctctccttttctttctcctct 220
              ||||||||||||||||||||||
Sbjct: 171551 cctctccttttctttctcctct 171530



>gi|21306691|gb|AC103596.2|   Homo sapiens chromosome 1 clone RP4-669H10, complete sequence
          Length = 121021

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 199   cctctccttttctttctcctct 220
             ||||||||||||||||||||||
Sbjct: 48342 cctctccttttctttctcctct 48363



>gi|6635875|emb|AL135960.1|   Human DNA sequence from clone RP1-18D14 on chromosome 1, complete
             sequence
          Length = 193358

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 206   ttttctttctcctcttctactccaaa 231
             ||||||||||||||||||| ||||||
Sbjct: 47505 ttttctttctcctcttctaatccaaa 47480



>gi|2642452|gb|AC002504.1|   Homo sapiens X PAC RP1-258N20 (Roswell Park Cancer Institute Human
            PAC Library) complete sequence
          Length = 134970

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 202  ctccttttctttctcctcttct 223
            ||||||||||||||||||||||
Sbjct: 5415 ctccttttctttctcctcttct 5394



>gi|35209055|emb|BX005238.8|   Zebrafish DNA sequence from clone DKEY-61P9 in linkage group 4,
            complete sequence
          Length = 166866

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 347  atgtgaaacagcattgtgtgtgtatt 372
            ||||||||||||| ||||||||||||
Sbjct: 1699 atgtgaaacagcagtgtgtgtgtatt 1674



>gi|14589694|gb|AC074093.6|   Homo sapiens BAC clone RP11-206I11 from 2, complete sequence
          Length = 155182

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 368    gtatttgttgaaagtgagtttgttgt 393
              ||||||||||||| ||||||||||||
Sbjct: 131494 gtatttgttgaaaatgagtttgttgt 131519



>gi|6911928|emb|AJ131016.1|HSA131016   Homo sapiens SCL gene locus
          Length = 193471

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 206   ttttctttctcctcttctactccaaa 231
             ||||||||||||||||||| ||||||
Sbjct: 47505 ttttctttctcctcttctaatccaaa 47480



>gi|26251788|gb|BC040537.1|   Homo sapiens, clone IMAGE:5265906, mRNA
          Length = 4047

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 206  ttttctttctcctcttctactccaaa 231
            ||||||||||||||||||| ||||||
Sbjct: 3728 ttttctttctcctcttctaatccaaa 3753



>gi|3176073|emb|AJ002486.1|MSAJ2486   Medicago sativa mRNA for protein phosphatase 1, gamma subunit
          Length = 1554

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 1    gatgagtgttgatgagacccttatgtgctc 30
            |||||||||||||||||| || ||||||||
Sbjct: 1044 gatgagtgttgatgagacactaatgtgctc 1073



>gi|3176071|emb|AJ002485.1|MSAJ2485   Medicago sativa mRNA for protein phosphatase 1, beta subunit
          Length = 1461

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 1    gatgagtgttgatgagacccttatgtgctc 30
            |||||||||||||||||| || ||||||||
Sbjct: 980  gatgagtgttgatgagacactcatgtgctc 1009



>gi|11094943|gb|AC084493.1|CBRG08J21   Caenorhabditis briggsae cosmid G08J21, complete sequence
          Length = 22787

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 202 ctccttttctttctcctcttct 223
           ||||||||||||||||||||||
Sbjct: 783 ctccttttctttctcctcttct 762



>gi|34495165|gb|AC127350.3|   Mus musculus BAC clone RP23-64P14 from chromosome 18, complete sequence
          Length = 190228

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 203    tccttttctttctcctcttct 223
              |||||||||||||||||||||
Sbjct: 175927 tccttttctttctcctcttct 175907



>gi|34482131|gb|AC127269.3|   Mus musculus BAC clone RP23-432B20 from chromosome 9, complete sequence
          Length = 212660

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 383    gagtttgttgtgagattgtat 403
              |||||||||||||||||||||
Sbjct: 147250 gagtttgttgtgagattgtat 147230



>gi|23499630|gb|AC122423.2|   Mus musculus BAC clone RP24-171N18 from 7, complete sequence
          Length = 141166

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                       
Query: 1      gatgagtgttgatgagacccttatgtgctcatttcagattctgaaaccagcagagaa 57
              ||||||||| ||||||||||| ||||| || || |||||| | || || ||||||||
Sbjct: 121982 gatgagtgtggatgagaccctcatgtgttccttccagattttaaagcctgcagagaa 121926



>gi|37620300|gb|AC134791.8|   Mus musculus chromosome 14, clone RP23-377F8, complete sequence
          Length = 210013

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 206   ttttctttctcctcttctactccaa 230
             ||||||||||||||||||| |||||
Sbjct: 75545 ttttctttctcctcttctattccaa 75521



>gi|31980771|ref|NM_013636.2|   Mus musculus protein phosphatase 1, catalytic subunit, gamma isoform
            (Ppp1cc), mRNA
          Length = 2393

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                     
Query: 1    gatgagtgttgatgagacccttatgtgctcatttcagattctgaaaccagcagagaa 57
            ||||||||| ||||||||||| ||||| || || |||||| | || || ||||||||
Sbjct: 1129 gatgagtgtggatgagaccctcatgtgttccttccagattttaaagcctgcagagaa 1185



>gi|14714913|gb|BC010613.1|   Mus musculus protein phosphatase 1, catalytic subunit, gamma
           isoform, mRNA (cDNA clone MGC:8123 IMAGE:3589168),
           complete cds
          Length = 2166

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 1   gatgagtgttgatgagacccttatgtgctcatttcagattctgaaaccagcagagaa 57
           ||||||||| ||||||||||| ||||| || || |||||| | || || ||||||||
Sbjct: 901 gatgagtgtggatgagaccctcatgtgttccttccagattttaaagcctgcagagaa 957



>gi|18203763|gb|BC021646.1|   Mus musculus protein phosphatase 1, catalytic subunit, gamma isoform,
            mRNA (cDNA clone MGC:13976 IMAGE:3487479), complete cds
          Length = 2393

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                     
Query: 1    gatgagtgttgatgagacccttatgtgctcatttcagattctgaaaccagcagagaa 57
            ||||||||| ||||||||||| ||||| || || |||||| | || || ||||||||
Sbjct: 1129 gatgagtgtggatgagaccctcatgtgttccttccagattttaaagcctgcagagaa 1185



>gi|33235760|gb|AC117668.9|   Mus musculus, clone RP23-367H12, complete sequence
          Length = 221526

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 383  gagtttgttgtgagattgtat 403
            |||||||||||||||||||||
Sbjct: 5489 gagtttgttgtgagattgtat 5469



>gi|32140818|gb|AY152836.1|   Felis catus clone BAC 160a17 major histocompatiblity complex classical
             class II region, partial sequence
          Length = 130898

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 200   ctctccttttctttctcctct 220
             |||||||||||||||||||||
Sbjct: 23990 ctctccttttctttctcctct 23970



>gi|32140815|gb|AY152835.1|   Felis catus clone PAC g7 major histocompatiblity complex classical
             class II region, partial sequence
          Length = 77680

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 200   ctctccttttctttctcctct 220
             |||||||||||||||||||||
Sbjct: 45946 ctctccttttctttctcctct 45926



>gi|23396222|gb|AC130455.2|   Homo sapiens chromosome 16 clone CTA-362G6, complete sequence
          Length = 149490

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 202    ctccttttctttctcctcttc 222
              |||||||||||||||||||||
Sbjct: 119803 ctccttttctttctcctcttc 119783



>gi|20564415|gb|AC025427.11|   Homo sapiens chromosome 10 clone RP11-29J13, complete sequence
          Length = 184555

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 371    tttgttgaaagtgagtttgttgtga 395
              ||||||||||||||||| |||||||
Sbjct: 172788 tttgttgaaagtgagttggttgtga 172764



>gi|20087106|gb|AC068062.7|   Homo sapiens chromosome 10 clone RP11-519L15, complete sequence
          Length = 95976

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   aatgaaatgcttttgtggagt 334
             |||||||||||||||||||||
Sbjct: 18409 aatgaaatgcttttgtggagt 18429



>gi|26344935|dbj|AK076009.1|   Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:2610028M06 product:protein
            phosphatase 1, catalytic subunit, gamma isoform, full
            insert sequence
          Length = 1787

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                     
Query: 1    gatgagtgttgatgagacccttatgtgctcatttcagattctgaaaccagcagagaa 57
            ||||||||| ||||||||||| ||||| || || |||||| | || || ||||||||
Sbjct: 1065 gatgagtgtggatgagaccctcatgtgttccttccagattttaaagcctgcagagaa 1121



>gi|26353187|dbj|AK088229.1|   Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
            full-length enriched library, clone:E430007K21
            product:protein phosphatase 1, catalytic subunit, gamma
            isoform, full insert sequence
          Length = 2314

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                     
Query: 1    gatgagtgttgatgagacccttatgtgctcatttcagattctgaaaccagcagagaa 57
            ||||||||| ||||||||||| ||||| || || |||||| | || || ||||||||
Sbjct: 1072 gatgagtgtggatgagaccctcatgtgttccttccagattttaaagcctgcagagaa 1128



>gi|15375156|gb|AC026401.7|   Homo sapiens chromosome 16 clone CTB-193M12, complete sequence
          Length = 201456

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 202    ctccttttctttctcctcttc 222
              |||||||||||||||||||||
Sbjct: 106000 ctccttttctttctcctcttc 106020



>gi|3417288|gb|U95740.1|HUU95740   Human Chromosome 16 BAC clone CIT987SK-A-362G6, complete sequence
          Length = 149480

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 202   ctccttttctttctcctcttc 222
             |||||||||||||||||||||
Sbjct: 29685 ctccttttctttctcctcttc 29705



>gi|30268424|emb|BX284114.6|   Mouse DNA sequence from clone RP23-258B4 on chromosome X, complete
             sequence
          Length = 181900

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 383   gagtttgttgtgagattgtat 403
             |||||||||||||||||||||
Sbjct: 11207 gagtttgttgtgagattgtat 11187



>gi|1280038|gb|U53456.1|MMU53456   Mus musculus protein phosphatase 1cgamma (PP1cgamma) mRNA, complete
            cds
          Length = 2294

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                     
Query: 1    gatgagtgttgatgagacccttatgtgctcatttcagattctgaaaccagcagagaa 57
            ||||||||| ||||||||||| ||||| || || |||||| | || || ||||||||
Sbjct: 1045 gatgagtgtggatgagaccctcatgtgttccttccagattttaaagcctgcagagaa 1101



>gi|25137140|emb|AL591544.30|   Mouse DNA sequence from clone RP23-386D6 on chromosome 11, complete
             sequence
          Length = 201673

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 199   cctctccttttctttctcctcttct 223
             ||||||||| |||||||||||||||
Sbjct: 15530 cctctccttctctttctcctcttct 15506



>gi|1680|emb|X61639.1|OCPP1B   O.cuniculus PP1-beta gene for protein phosphatase 1
          Length = 993

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 1   gatgagtgttgatgagacccttatgtgctcatttcagattctgaaacca 49
           ||||||||| ||||||||  | ||||| |||||||||||  ||||||||
Sbjct: 847 gatgagtgtggatgagactttgatgtgttcatttcagatattgaaacca 895






  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
  or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 4, 2003  5:11 PM
  Number of letters in database: -24,715,059
  Number of sequences in database:  1,772,006
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 647,557
Number of Sequences: 1987664
Number of extensions: 647557
Number of successful extensions: 14805
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 14764
Number of HSP's gapped (non-prelim): 41
length of query: 888
length of database: 9,567,374,405
effective HSP length: 21
effective length of query: 422
effective length of database: 9,525,633,461
effective search space: 4019817320542
effective search space used: 4019817320542
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)